Go through the PET, and replace every o-ring and seal on the engine. They're not expensive, and you'll never have the kind of access to them again (until you pull the engine again, that is!).
You should also have the cylinder bore diameters measured by a machine shop at the top, center, and bottoms of the bores. These blocks are incredibly tough, but on the off chance that yours shows some wear, you'd want to have the bores honed, and matching rings installed. This is not a likely situation, though, but it wouldn't hurt to check.
Since you have the head off, you should get a standard valve job. The valve seats on these engines are very hard, but my guides were pretty work. And as DaveN says, new conrod bearings are a good idea as well.